Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceCTYSVYDSIGKMVVEDKDLPTNRRDYYTIGKKKYTFYFKENCDFDYSKPPLPRCWHVSGIPKGLYDQVQGMEQPCPAQ
2JVG Chain:A ((195-266))---GAMVSIEKAIVRHDERVKSANDAISKLNEKDSIENRRLAQREVNKAPMDVKEHLQKQLDALVAQKDAEKKVA---


General information:
TITO was launched using:
RESULT:

Template: 2JVG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 125 1178 9.42 16.35
target 2D structure prediction score : 0.26
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : 9.42
2D Compatibility (Sec. Struct. Predict.) : 0.26
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.107

(partial model without unconserved sides chains):
PDB file : Tito_2JVG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2JVG-query.scw
PDB file : Tito_Scwrl_2JVG.pdb: