Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIMLQKIYEQMANFYDSIEEEYGPTFGDNFDWEHVHFKFLIYYLVRYGIGCRKDFIVYHYRVAYRLYLEKL--VMNRGFISC
2GOM Chain:A ((105-165))-IKKEQKLIQAQNLVREFEKTHTVSAHRKAQKAVNLVS-------------------FEYKVKKMVLQERIDNVLKQGLVR-


General information:
TITO was launched using:
RESULT:

Template: 2GOM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 172 -12337 -71.72 -209.09
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : -71.72
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.428

(partial model without unconserved sides chains):
PDB file : Tito_2GOM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2GOM-query.scw
PDB file : Tito_Scwrl_2GOM.pdb: