Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence---------------------------------------------------------------------MTYSHIYQVLFLPKLSIKRWHFLGLVLVNFALSYLSHFELFM----VQWKHVIQII----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5LTE Chain:A ((5-337))FKPLESYREDFSFRNSPAAIARFPFPFPEDQYMYSVNLEPAVSRDPGSVFEHQFDVDEHYVSEMAERARVLELDPGRCLVMPHMAQAAWDTLAMLMEHLARDYPQHFRLTRQGDAWHWQNLALGIDQRFTFGDPASLPCEPLEYITRQMQGDFAVLDQRDGDLFMDAGMVTCPADWSLRFDAGMSFKQWHSPVPMAHQMGVFDRALKYLLNIQVGAPVRRLNWTLTINPRLDTSPETYHEWGNDRGKVTPDNVGRLVHLRVELQLMARLPRSNALLFGIRTYLISLDELVSNPAWAQRLHRVMRDLPDPIADYKGITRYRQTLVDWLRRFDPE


General information:
TITO was launched using:
RESULT:

Template: 5LTE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 62 -6475 -104.44 -124.52
target 2D structure prediction score : 0.44
Monomeric hydrophicity matching model chain A : 0.55

3D Compatibility (PKB) : -104.44
2D Compatibility (Sec. Struct. Predict.) : 0.44
1D Compatibility (Hydrophobicity) : 0.55
QMean score : 0.017

(partial model without unconserved sides chains):
PDB file : Tito_5LTE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5LTE-query.scw
PDB file : Tito_Scwrl_5LTE.pdb: