Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTLEWEEFLDPYIQAVGELKIKLRGIRKQYRKQNKHSPIEFVTGRVKPIESIKEKMARRGITYATLEHDLQDIAGLRVMVQFVDDVKEVVDILHKRQDMRIIQERDYITHRKASGYRSYHVVVEYTVDTINGAKTILAEIQIRTLAMNFWATIEHSLNYKYQGDFPDEIKKRLEITARIAHQLDEEMGEIRDDIQEAQALFDPLSRKLNDGVGNSDDTDEEYR
5F2V Chain:Y ((3-195))---QWERFLVPYRQAVEELKVKLKGIRTLYEYEDDHSPIEFVTGRVKPVASILEKARRKSIPLHEIE-TMQDIAGLRIMCQFVDDIQIVKEMLFARKDFTVVDQ-------------SYHLVVLYPLQTVSGEKHVLVEIQIRTLAMNFWATIEHSLNYKYSGNIPEKVKLRLQRASEAASRLDEEMSEIRGEVQEA--------------------------


General information:
TITO was launched using:
RESULT:

Template: 5F2V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain Y - contact count / total energy / energy per contact / energy per residue : 658 -97859 -148.72 -543.66
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain Y : 0.83

3D Compatibility (PKB) : -148.72
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.83
QMean score : 0.526

(partial model without unconserved sides chains):
PDB file : Tito_5F2V.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5F2V-query.scw
PDB file : Tito_Scwrl_5F2V.pdb: