Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence ------------------------------------------------------------------------------------------------------MLRLVYYQFLHNKKQWLGVS--PVIFVSS---LVMGLAVNGVINVE---NNSQVFVGLPDPKPIFMFPIVFGGVTLFFVLSNIINMLVEIFRDDYELLEVLGASRLQLSFLVGGQIFIISSIISFIAYLCSIFVTSNYYYFLQYFFGENILPDIQFQTSAVGCIITVVLISFLAFLSGCFYTFKKIRNRKSSKIRHVLSIVKRILLLA---GFSVIW------LLSLQ-QIFQDSTILAKAQIIFNIVILDIVIIYQLSPFI----QSCFIKLLSIIIFRNNF--MFIVSKWNLLYCKSYIKSISAAITGAILLISSFQMISQNILSQFQDDSDLELKVAFIVYVGAPILIVLANIISIAFLSSHQERIE-IQQFEILGTSNYQMVKIKVGEAIFLTFVTSLIAFLL------NIKIMALIYYSLEDIL--IDDMNLLGLIL--PNFIVSIILFILIFITKSSYFIFKNAKIIS 5JM8 Chain:A ((11-574)) TLDVAAQCFLNSLVRETKDWRLTEYQPTQLIIPLGEQQALHFRVAYFSPTQHHRFEFPARLVTASGSHPVDFATLSRLIVDKLQHQLLLPATSCETFHQRVMESHAHTQQAIDARHDWAALREKALNFGEAEQALLVGHAFHPAPKSHEPFNQQEAERYLPDFAPHFPLRWFAVNKTQIAGESLHLNLQQRLTRFAAENAPQLLNELSDNQWLFPLHPWQGEYLLQQ-EWCQELVAKGLIKDLGEA--GAPWLPTTSSRSLYCATSRDMIKFSLSVRLTNSVRTLSVKEVKRGMRLARLAQTDDWQTLQARFPTFRVMQEDGWAGLRDLHGNIMQESLFALRENLLVDQPQSQTNVLVSLTQAAPDGGDSLLVAAVKRLSDRLGITAQQAAHAWVDAYCHQVLKPLFTAEADYGLVLLAHQ---QNILVQMLGDL--------------PVGLIYRDCQGSAFMPHAAGWLDTIGEAQAENVFTREQLLRYFPYYLLVNSTFAVTAALGAAGLDSEANLMARVRTLLAEMRDQVTHKTCLNYVLENPYWNVKGNFFCYLNDPSVIYFDFANPLLAQ

General information: TITO was launched using: RESULT: Template: 5JM8.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2032 -121286 -59.69 -289.47 target 2D structure prediction score : 0.42 Monomeric hydrophicity matching model chain A : 0.62 3D Compatibility (PKB) : -59.69 2D Compatibility (Sec. Struct. Predict.) : 0.42 1D Compatibility (Hydrophobicity) : 0.62 QMean score : 0.197

(partial model without unconserved sides chains): PDB file : Tito_5JM8.pdb: (Unconserved sides chains are recalculated) : Sequence: align-5JM8-query.scw PDB file : Tito_Scwrl_5JM8.pdb: