Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMKILVQNNQPTSGNIISSDNV----GYLIEEPK------------LFLSKTGLENLKY-LSNLYGVDYNQEIFRSLIQE----LDLTQSINKKVKTYSLGTKQKLALLLTLVTEPDILILDEPTNGLDIESSQIVLSVLKNLALHENVGILISSHKLEDIEEICERVLFLENGLLTFQKVGKDSHNFLFEIAFSSATDRDIFITKQEFGDIVQEEGLSITMSGNIQSSELFKFFNENSIKVVDFETKKETLKDIYLNRSK
1OXT Chain:A ((48-224))-MRIIAGLDVPSTGELYFDDRLVASNGKLIVPPEDRKIGMVFQTWALYPNLTAFENIAFPLTNM---KMSKEEIRKRVEEVAKILDIHHVLNHFPRELSGGQQQRVALARALVKDPSLLLLDEPFSNLDARMRDSARALVKEVQSRLGVTLLVVSHDPADIFAIADRVGVLVKGKLV--QVGK------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1OXT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 682 12329 18.08 79.03
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : 18.08
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.451

(partial model without unconserved sides chains):
PDB file : Tito_1OXT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1OXT-query.scw
PDB file : Tito_Scwrl_1OXT.pdb: