Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIPLLTFARHKFVYVLLTLLFLALVYRDVLMTYFFFDIHAPDL-AKFDGQAIKNDLLKSALDFRILQFNLGFYQSFIIPIIIVLLGFQY--IELKNKVLRLSIGREVSYQGLKRKLTLQVASIPCLIYLVTVLIIAIITYFFGTFSPLGWNSLFSDGSGLQRLLDGEIKSYLF---FTCVLLIGIFINAIYFLQIVDYVGNVTRSAITYLMFLWLGSMLLYSALPYYMVPMTSLMQASYGDVSL---MKLFTPYILYIVPYMVLEKY-EDNV-
5T1O Chain:B ((2-256))-RIRALPAAPG---------VAIAEGWQDATLPLMEQVYQASTLDPALERERLTGALEEAANEFRRYSKRFAAGAQKETAAIFDLYSHLLSDTRLRRELFAEVDKGSVAEWAVKTVIEKFAEQFAALSD-------NYLKERAGDLRALGQRLLFHLDDANQGPNAWPERFILVADELSATTLAELPQDRLVGVVVRD--GAANSQAAIMVRALGIPTVMGADIQPSVLHRRTLIVDGYRGELLVDPEPVLLQEYQRLISEEIELSRLAEDDVN


General information:
TITO was launched using:
RESULT:

Template: 5T1O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1093 -70451 -64.46 -288.73
target 2D structure prediction score : 0.33
Monomeric hydrophicity matching model chain B : 0.63

3D Compatibility (PKB) : -64.46
2D Compatibility (Sec. Struct. Predict.) : 0.33
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.127

(partial model without unconserved sides chains):
PDB file : Tito_5T1O.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5T1O-query.scw
PDB file : Tito_Scwrl_5T1O.pdb: