Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKLISWNIDSLNAALTSDSARAKLSQEVLQTLVAENADIIAIQETKLSAKGPTKKHVEILEELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAPSTMDLEGRIITLEFDAFFVTQVYTPNAGDGLKRLEERQVWDAKYAEYLAELDKEKPVLATGDYNVAHNEIDLANPASNRRSPGFTDEERAGFTNLL-ATGFTDTFRHVHGDVPERYTWWAQRSKTSKINNTGWRIDYWLTSNRIADKVTKSDMIDSGARQDHTPIVLEIDL
4IEM Chain:A ((61-317))LKICSWNVDGL---------RAWIKKKGLDWVKEEAPDILCLQETKCSE---NKLPAELQE--LPGLSHQYWSAPS-DKEGYSGVGLL-SRQCPLKVSY-GIGD-EEHDQEGRVIVAEFDSFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLYPNTPYAYTFWTYMM-NARSKNVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLAL


General information:
TITO was launched using:
RESULT:

Template: 4IEM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1436 -84039 -58.52 -328.28
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain A : 0.80

3D Compatibility (PKB) : -58.52
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.447

(partial model without unconserved sides chains):
PDB file : Tito_4IEM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4IEM-query.scw
PDB file : Tito_Scwrl_4IEM.pdb: