Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MKKLQFIASCPQHGVLDHPPNECHITQEYVAALLFKQLGNYGFDA--QHIVHEHE----KVEVSIDNHLL-PLSITCQQTDHDGHLMCEISANPDEEQDWFEKIETQSIIRQLAQAVENSLKADHSFSAFEWKS 5JJD Chain:B ((19-108)) -------------------------VEEMVQNHMTYSLQDVG-DANWQLVVEEGEMKVYRREVEENGIVLDPLKATHAVKGVTGHEVCNYFWNVDVRNDWETTIENFHVVETLA--------------------

General information: TITO was launched using: RESULT: Template: 5JJD.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 131 4728 36.09 58.37 target 2D structure prediction score : 0.49 Monomeric hydrophicity matching model chain B : 0.64 3D Compatibility (PKB) : 36.09 2D Compatibility (Sec. Struct. Predict.) : 0.49 1D Compatibility (Hydrophobicity) : 0.64 QMean score : 0.160

(partial model without unconserved sides chains): PDB file : Tito_5JJD.pdb: (Unconserved sides chains are recalculated) : Sequence: align-5JJD-query.scw PDB file : Tito_Scwrl_5JJD.pdb: