Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLFSGSSMSEQIFIQGPVGKIELFVDRPE--GEIKGFAVVCHPHPLQGGTPQHKVPALLTQIFNEYGCIVYRPSFRGLGGSEGVHDE--GHGETEDILAVIEHVRKLHAGLPFYAGGFSFGSHVLAKCHAQLSPELQPVQLILCGLPTATVVG-L-----------------R-HY----------------K--TP--EIQGDILLIHGEQDDITLLSDAIEWAKP-QKHPITILSGANHFFTGYLKQLRQIITRFIIMK
2WTM Chain:B ((8-247))---------------CDGIKLNAYLDMPKNNPEKCPLCIIIHGFTGHSE-ER--HIVAVQETLNEIGVATLRADMYG---------DHTLFKWLTNILAVVDYAKKLDFVTDIYMAGHSQGGLSVMLAAAMERD--IIKALIPLSPAAMIPEIARTGELLGLKFDPENIPDELDAWDGRKLKGNYVRVAQTIRVEDFVDKYTKPVLIVHGDQDEAVPYEASVAFSKQYKNCKLVTIPGDTHCYDHHLELVTEAVKEFMLE-


General information:
TITO was launched using:
RESULT:

Template: 2WTM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 946 -52717 -55.73 -281.91
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain B : 0.66

3D Compatibility (PKB) : -55.73
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.560

(partial model without unconserved sides chains):
PDB file : Tito_2WTM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2WTM-query.scw
PDB file : Tito_Scwrl_2WTM.pdb: