Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRQGFIKAFANLVGWIFALIMGAKYAVLLAPSMSGLSQDPVVQKIAAFAFIALLIIVLTWIVTAFLNGLLKSLKLGPLNRLAGGAFGSLKGLLVVLITMQGVGPWVESSPHWKQSKFIQFLLPYAPLATELSKDAASEAFHQITSGGGVTRTSPKPMDESEETELRPDHSTKDPFY
2L9U Chain:A ((642-660))---------------------------------------------------------------------------------LTMALTVIAGLVVIFMMLG----------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2L9U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 4 -1045 -261.13 -54.97
target 2D structure prediction score : 0.47
Monomeric hydrophicity matching model chain A : 0.47

3D Compatibility (PKB) : -261.13
2D Compatibility (Sec. Struct. Predict.) : 0.47
1D Compatibility (Hydrophobicity) : 0.47
QMean score : 0.226

(partial model without unconserved sides chains):
PDB file : Tito_2L9U.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2L9U-query.scw
PDB file : Tito_Scwrl_2L9U.pdb: