Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence---------------------------------------------MPIDTQLTTLFCLIDD--FCTDITQNVEQYMLT---YGQTKRLRQSKIHASEVITLLLWFHLTGSRN---FKAFYLYWAKPF-------LCSYFTNLPSYSRFIELKAKYAMYFVALIESLKVHSAGIAF--IDSTKLAVCHNKRIHQHRVFADSASRGKTSVDWFYGFKIHLICDHIGRLVSYCITTGNVDDRKVLPDLIEHSKLKGKLFGDRGYVGKNWKSRLAEVGVQLITRVKRNMKPQVLAPFDHAVLKKRGIIEAPFKLMKSQFDLEHSRHRSKMGLLTTIFAALTLYALVLVNGYKSGIQQILKPIDLNSA
5HC3 Chain:A ((22-365))MTNKIAEDPRIDPRIKAIFSGMDLGGGGDVESREAMLEAASSEEATAVRDGLRVFLDACDNEEIAPSAGLKIEDYEFTSEPDGNIAKIQYIRPDSTDKLPCVYYIHGGGMQSLSCYYGNYRAWGKIIASNGVAVAMVEFRNALVPSALPEV-APYPAGLNDCVSGVKWVAAHADELGIDASRIIIAGESGGGNLTLAAGLRLKQEGSQDLIQG--LYALCPYIAGSWPSEDSPSSTENNGILLDL--HNNQGAMGYGIEAYEMRDPLAWPGFATEEDVS----GLVPTFISVNECDPLRDEGI-NFYRLLLRAGVS---AKCRQVMG---TIHG-TEIFPIACPDVSRDTAASIANFCKGG--


General information:
TITO was launched using:
RESULT:

Template: 5HC3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1458 -23590 -16.18 -83.65
target 2D structure prediction score : 0.31
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -16.18
2D Compatibility (Sec. Struct. Predict.) : 0.31
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.121

(partial model without unconserved sides chains):
PDB file : Tito_5HC3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5HC3-query.scw
PDB file : Tito_Scwrl_5HC3.pdb: