Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFQGYSKDRREETCSYCGAIYIVDIPGLPGHEEREEYFCPECSHVNFARASNSPRVSLVKARTDGKNDKSPSFQALIDSYKDE
5IY9 Chain:L ((13-57))-------QPMIYICGECHTENEIKS-------R-DPIRCRECGYRIMYKK-RTKRLVVFDA----------------------


General information:
TITO was launched using:
RESULT:

Template: 5IY9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain L - contact count / total energy / energy per contact / energy per residue : 111 -11296 -101.77 -251.02
target 2D structure prediction score : 0.44
Monomeric hydrophicity matching model chain L : 0.63

3D Compatibility (PKB) : -101.77
2D Compatibility (Sec. Struct. Predict.) : 0.44
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.450

(partial model without unconserved sides chains):
PDB file : Tito_5IY9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5IY9-query.scw
PDB file : Tito_Scwrl_5IY9.pdb: