Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKQFAVIGNPIEQSRSPELHHA----FAEKTGVDLNYQKRLAPLDGFESSMRS-FFAEGGSGMNVTVPFKEQAFALCNVLTERAQIAKAVNTLWMENGKLHGDNTDGQGLVAAIQALEWNLENTTILILGAGGATRGVIYPLVQAGAKKIVI--ANRTLARAEQLVDDLKTAVPQAQLQAISLNDLEGDFDIVINATSASLSGDALQLPEKLK-----FKYAYEMAYGKPSSFLDQAKQRNVPYAEGFGMLVGQAIEAFSIWNGVRPQLKDFL
3PHI Chain:A ((4-246))--KSFGVFGNPIKHSKSPLIHNACFLTFQKELRFLGHYHPILLPL---ESHIKSEFLHLGLSGANVTLPFKERAFQVCDKIKGIALECGAVNTLVLENDELVGYNTDALGFYLSLK-----YQNA--LILGAGGSAKALACELKKQGLQVSVLNRSSRGLDFFQRLGCDCFMEPPKSA------------FDLIINATSASLHNELPLNKEVLKGYFKEGKLAYDLAYGFLTPFLSLAKELKTPFQDGKDMLIYQAALSFEKFS----------


General information:
TITO was launched using:
RESULT:

Template: 3PHI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1266 6468 5.11 28.37
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : 5.11
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.355

(partial model without unconserved sides chains):
PDB file : Tito_3PHI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3PHI-query.scw
PDB file : Tito_Scwrl_3PHI.pdb: