Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequence-------------------------------------------------------------------------------------------------MRLMINKSMKNIYIMGLLLACSGFAMAETVTQQPTGQPVRTASNPN-AIRIVTRPEIMGLWGMEIPNNKKCVEYYNFRSSNDVV--IKSGEEWSYGIYEYQPSDDPKEQLSALVMQIKFDNNKVDCSGQKQDQTGDISQYFVQWKNDHTINFCSTAKGEQCFATLRRMLP------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5L8S Chain:A ((1-604))MINFPKPTVEQFFRTYTITNFAVSSDEKRLVFNANLNGKMNLWAMDLPDTYPYLFAHRDESCNFIKFDPENRYVLAGFDKDGDENYQIYAIPNEGGLPHPLITGDASEKYYFSHLSADGKCVYYETSKENPSFLNTRIRNLETGEDRLLNVGEVSTTELAAVSENEESFVYLRAFANTYIVGFVKMGEE------TFNITPDPEKVH--VAMEPVFTDNETIYFATDYDSD---EMYLAKFDLTSKEFSKVLAFDGESIQSVKWDKDNKAFYLITVKGVTDILYRYDVATDKVEECSLPVDIIEQIQVAKSGNLYILGRSATVPHNVYQSSNGVEWKQLTNNRVLGLSPEDMVEPDIVSYTSFDGMEIEALLFKAKPENDNGYTIFWPHGGPQSAERKMFRSMFQCFINRGYTIFAPNFRGSTGYGSAFTKLVELDWGEGPRLDCIAGIEWLFESGFTDRNKLFLVGGSYGGYMALLLHGRHSDYFRAVVDIFGPSDLFTFINSVPPHWKPIMERWLGDPERDKERFIKDSPVTYLDGMVKPMLVIQGAKDPRVVKEESDQIVAKLKEKGRDVEYLVLEDEGHGFSKKENEIKVYSLMLAFLEKHQALEHHHHHH


General information:
TITO was launched using:
RESULT:

Template: 5L8S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 686 61800 90.09 396.15
target 2D structure prediction score : 0.44
Monomeric hydrophicity matching model chain A : 0.54

3D Compatibility (PKB) : 90.09
2D Compatibility (Sec. Struct. Predict.) : 0.44
1D Compatibility (Hydrophobicity) : 0.54
QMean score : 0.245

(partial model without unconserved sides chains):
PDB file : Tito_5L8S.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5L8S-query.scw
PDB file : Tito_Scwrl_5L8S.pdb: