Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMARNADYIDIAGFTIAPQ-TLLPYGHLYNASLA--GNQLNSAHGFAGPILAA-PIWLI--NKPERFFAIAPYLYVPIGTYHSDEALNI------------------DENRWKFDLQLGVFNNVAMIFLPKSRPMLFDMVHMMILLE---
2NXP Chain:A ((8-156))QPDVSAVLSAYNQQGDPTMYEEYYSGLKHFIECSLDCHRAELSQLFYPLFVHMYLELVYNQHENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDFRTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFD


General information:
TITO was launched using:
RESULT:

Template: 2NXP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 421 -1578 -3.75 -12.93
target 2D structure prediction score : 0.43
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : -3.75
2D Compatibility (Sec. Struct. Predict.) : 0.43
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.082

(partial model without unconserved sides chains):
PDB file : Tito_2NXP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2NXP-query.scw
PDB file : Tito_Scwrl_2NXP.pdb: