Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence---------MTKKNNAPELHKYRGLTSTEQMVIHQMLISYVREENCRFNIIMTGTAEPYNLVKLTSINFENEASAIWVHFETITGEQIALPIDFLSRIEFSGQQ--EI---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5IC7 Chain:A ((58-422))RKLRPETIDIQRTRDIPDTHK----AAISSLAFHP-----------RYPILLSSS--TSSIMYLHKLD----ASAYPTPNPLLTSVHVKRT--DLRRAAFVGPDGGEIIFAGRRRYFHCWNLSSGLVKKVSKIQGHQKEQRTMERFRVSPCGRYMALVASDKKGGGMLNIINVGTMQWIAQARIDGRHGVADFAWWSDGNGLTIAGRDGQVTEWSMITRRTVGIWRDEGTVMALGGRNGPAELGGDRWVAIGSNSGILNVYDRNDLIEIRIKKYPTPTRVFEQLTTSISVVAFSPDGQLLAFGSQHKKDALRLVHLPSCTVYRNWPTEQTPLGRVTAIAFSSKSDVLAVGNDVGRVRLWEIRG


General information:
TITO was launched using:
RESULT:

Template: 5IC7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 216 -6417 -29.71 -86.72
target 2D structure prediction score : 0.43
Monomeric hydrophicity matching model chain A : 0.56

3D Compatibility (PKB) : -29.71
2D Compatibility (Sec. Struct. Predict.) : 0.43
1D Compatibility (Hydrophobicity) : 0.56
QMean score : 0.493

(partial model without unconserved sides chains):
PDB file : Tito_5IC7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5IC7-query.scw
PDB file : Tito_Scwrl_5IC7.pdb: