Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSQEEKLPKILIVEDDERLARLTQEYLIRNGLEVGVETDGNRAIRRIISEQPDLVVLDVMLPGADGLTVCREVRPHYHQPILMLTARTEDMDQVLGLEMGADDYVAKPVQPRVLLARIRALLRRTDKTVEDEVAQRIEFDDLVIDNGGRSVTLNGELVDFTSAEYDLLWLLASNAGRILSREDIFERLRGIEYDGQDRSIDVRISRIRPKIGDDPENPKRIKTVRSKGYLFVKETNGL
1NXS Chain:A ((2-119))-------KKILIVDDEKPISDIIKFNMTKEGYEVVTAFNGREALEQFEAEQPDIIILD--LPEIDGLEVAKTIRKTSSVPILMLSAKDSEFDKVIGLELGADDYVTKPFSNRELQARVKALLRRS-----------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1NXS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 550 -73334 -133.33 -632.19
target 2D structure prediction score : 0.78
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -133.33
2D Compatibility (Sec. Struct. Predict.) : 0.78
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.694

(partial model without unconserved sides chains):
PDB file : Tito_1NXS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1NXS-query.scw
PDB file : Tito_Scwrl_1NXS.pdb: