Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGANSTLIFGILINIAILLVFFRFLMQLAAVSPYNPVVLSTVKATKIVDIFGRIFPTVAKGRFNLAALVLLIILYLLKIFGVMYLSGSMPNSPVHLVILTFVTMIQDLIRFCRYLIFATIILSWVVMFTQSRSPYIEVIQDLAEPLLAPFRHLLPNMGMIDLSPILAFLALYIAEILMNEVAKVLLTGL
1DEB Chain:A ((1-54))----------------------------------------------------------------------------------------------------------------------------------AAASYDQLLKQVEALKMENSNLRQELEDNSNHLTKLETEASNMKEVLKQLQGSI-----


General information:
TITO was launched using:
RESULT:

Template: 1DEB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 12 284 23.63 5.25
target 2D structure prediction score : 0.80
Monomeric hydrophicity matching model chain A : 0.37

3D Compatibility (PKB) : 23.63
2D Compatibility (Sec. Struct. Predict.) : 0.80
1D Compatibility (Hydrophobicity) : 0.37
QMean score : 0.075

(partial model without unconserved sides chains):
PDB file : Tito_1DEB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1DEB-query.scw
PDB file : Tito_Scwrl_1DEB.pdb: