Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTTEHFDLANPVTKVDDIPDYEMYSQTIDSLNKRF--GNRVLKGIKIGYIASEKDRIIDYLADKDYDLKLLSVHHNGQFDY-LDDEVK-DMDPAIVIPQYFAQLSEALV-VIEADVFAHFDYGFRVFGLSVAE--FKQYEAQFLPILDQVIKNKLAFELNAKSAYLYDNLALYEYVIDLCLSRGGTLF
4GC3 Chain:A ((38-221))CFTEHRDFYFPG--MDFSLNLPEYFQEINQLQAEFKDKIKIKIGLEMGIDLRFKSEINQFIDSAPFDFVIASVHEIGDIEVYDGTEFYLQKTKEEAQREYLLACLDVVQNFENYNSFGHLDYVARYGPYTDKSIKFAENREILFEILRALASKEKALEINTRLFDDPKTEQFYSDLLINFKRLGGK--


General information:
TITO was launched using:
RESULT:

Template: 4GC3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 777 -21798 -28.05 -123.15
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -28.05
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.387

(partial model without unconserved sides chains):
PDB file : Tito_4GC3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4GC3-query.scw
PDB file : Tito_Scwrl_4GC3.pdb: