Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MNLKGASPMKAVTWQGKQKMEIRNVD--DPKILEPTDAIIRITATAICGSDLHLYHHGEAVLEKGYVVGHEPMGIVEEVGSQVQTLKKGQRVVIPFNISCGHCHFCLNHMESQC---DESNPD-QLYGGLFGFGKLNG---NHWGGQAEYLRVPYADSTSFVVPDNDLPDEKVLFLSDILPTAYWSVEN-AGVKKGDTVVILGSGPVGLFAQKFAVMAGAERVIAVDPVQHRLDKAANYNGVETYFLEDTAQAGTE-LYELAKGGADVIIDCVG-MDGLEPVKEKAKNLVSLQSGTISPLQMASQAVKKFGTVQVTGVYMTPASS----YPLQEFFMRDI-AVKHGQAPIIHLMPKIYAMIAEGLFDPTQIITHSLPLSEAAQAYEIFDKKEDKNIKVVLKP 1U3V Chain:A ((12-372)) ----------AVLWEVKKPFSIEDVEVAPPKAYE---VRIKMVAVGICRTDDHVVS-GNLVTPLPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRF-TCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTM-----------------MASLLCCHEAC---GTSVIVGV--PPASQNLSINPMLLLTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPFEKINEGFDLLH--SGKSIRTVL--

General information: TITO was launched using: RESULT: Template: 1U3V.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2174 -61443 -28.26 -178.61 target 2D structure prediction score : 0.50 Monomeric hydrophicity matching model chain A : 0.74 3D Compatibility (PKB) : -28.26 2D Compatibility (Sec. Struct. Predict.) : 0.50 1D Compatibility (Hydrophobicity) : 0.74 QMean score : 0.389

(partial model without unconserved sides chains): PDB file : Tito_1U3V.pdb: (Unconserved sides chains are recalculated) : Sequence: align-1U3V-query.scw PDB file : Tito_Scwrl_1U3V.pdb: