Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMINMEKETIVEVTKLGFTIQAAVKVIGKDLLITLTGGDTPHIGTVTTFSRDTEMQTVRFPSHDGRFHKDDVLAEKIAVIIKTA-VPGSCTITSGIHVDHISNAQINASFPMSEEL-GYKILDWLEKIDFHIK-EPVYYKDGEKPL
4GZV Chain:A ((4-142))KTKFKAADLKGIWQLCHYVSESPDVPGALKPSNTFKVLSDD-GRIVNFTIIPGADAIITGYGTYKQLTDDSYKESIEKNIHLPMLDN---QDNILEFEIKDNDYLHLKYFIKSDLNGNELNTWYYETWKRVEMPAKFPEDIVR--


General information:
TITO was launched using:
RESULT:

Template: 4GZV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 499 8828 17.69 64.91
target 2D structure prediction score : 0.39
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : 17.69
2D Compatibility (Sec. Struct. Predict.) : 0.39
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.080

(partial model without unconserved sides chains):
PDB file : Tito_4GZV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4GZV-query.scw
PDB file : Tito_Scwrl_4GZV.pdb: