Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKNMYYPYLRGKQFDLLALKEALSRGLLSNKIQPVIEPVRDSATLKNVIELFQKKHHPIAVIQNPQVGQFKLFDQHVHSWTVKENSSVVPAQILTPENLSEVLDS----PPAFLVFDGQHYPKDTEVWKQLAGVDSKFLIPDTSRFRIWLPENKIVIRDSFQTRKHVESYADKTDDFFSDDYLFFHADGYIGFSDFTIEGSRYFDKGFPSRALAIHLTYIDAYGNIRVKHFVSDSNDSAKDQALKFLEA---------GDKMKKWIMRHHHQLLITSGMI-----------ELLALYQQQKFPG-----LGVLKKWSLMHHL---ELISHLLDHPKDW--------LKYYSKVQELYEVIQ-------
1FUI Chain:A ((1-355))MKKISLP-----KIGIRPVIDG-RRMGVRESLEEQTMNMAKATAALLTEKLRHACGAAVECVISDTCIAGMAEAAACEEKFSSQNVGLTITVTPCWCYGSETIDMDPTRPKAIWGFNGTERP----GAVYLAAALAAHSQKGIPAFSIY-GHDVQDADDTSIPADVEEKLLRFARAGLAVASMKGKSYLSLGGVSMGIAGSIV-DHNFFESWLGMKVQAVDMTELRRRIDQ-KIYDEAELEMALAWADKNFRYGEDENNKQYQRNAEQSRAVLRESLLMAMCIRDMMQGNSKLADIGRVEESLGYNAIAAGFQGQRHWTDQYPNGDTAEAILNSSFDWNGVREPFVVATENDSLNGVAMLMGHQLTGT


General information:
TITO was launched using:
RESULT:

Template: 1FUI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1326 -25267 -19.05 -82.03
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -19.05
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.186

(partial model without unconserved sides chains):
PDB file : Tito_1FUI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1FUI-query.scw
PDB file : Tito_Scwrl_1FUI.pdb: