Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLKNFKEVIAAILPMTVLIVILTFVFAPLEGEDLASFLVGAAIMMIGMTLFLFGADYSMMEVGDLVGKYMIKKKSLTVLVSLGFAIGIVITIAEPSVQVLGQQVYDI------SDGEIGRVLLIGIVSV----GTGVFLAFALLRVVFKLSYYQLMAIGYIGVL-----IASFF-----TSSEFMPIAFDSGGVTTGPVTVPFILALAGGMTSMIKQKKNENDSFGMVGIASLGPILAVMILGVIFQ
5HGZ Chain:A ((2-212))--MTEEERSSALSEVSLRL---------LCHDDIDTVKHLCGDW--------FPIEYPDSWYRDITSN----KKFFSLAATYRGAIVGMIVAEIKNRTKIHKEDGDILASNFSVDTQVAYILSLGVVKEFRKHGIGSLLLESLKDHISTTAQDHCKAI-YLHVLTTNNTAINFYENRDFKQHHYLPYYYSIRGVLKDGFTYVLYINGGHPPWTILDYIQHLGSALASLSPCSIPH------------


General information:
TITO was launched using:
RESULT:

Template: 5HGZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 825 -92645 -112.30 -485.05
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -112.30
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.135

(partial model without unconserved sides chains):
PDB file : Tito_5HGZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5HGZ-query.scw
PDB file : Tito_Scwrl_5HGZ.pdb: