Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSFSNGAISESTSEMEKASRMSEINFGVSLVFWGKQEIS
1N6J Chain:G ((4-29))--SPKGSISEETKQKLKSAILSAQSAAN-----------


General information:
TITO was launched using:
RESULT:

Template: 1N6J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain G - contact count / total energy / energy per contact / energy per residue : 29 1841 63.48 70.81
target 2D structure prediction score : 0.81
Monomeric hydrophicity matching model chain G : 0.59

3D Compatibility (PKB) : 63.48
2D Compatibility (Sec. Struct. Predict.) : 0.81
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.455

(partial model without unconserved sides chains):
PDB file : Tito_1N6J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1N6J-query.scw
PDB file : Tito_Scwrl_1N6J.pdb: