Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MTDKQKIDEFFWNKTTPEVARDLLGMYLEHDTPEGR-LAGYIVDAEAYLGPEDEAAHSYGLRRTPRVRAMYEKPGTIYLYTM-HTHRILNIITQPEGIPQGVMIRAIEPAAMIDQMSKNRGGK-TGPDISNGPGKLVEALAIPQELYGQSIADSSLRLVFE-KK--KTPKKINALPRIGIPNKGVWTEKPLRFVVSGNPYISLQRKNQIEKDWGWRKENEKEGSINIFR 3UBY Chain:A ((2-214)) -PHMTRLGLEFFDQPAVPLARAFLGQVLVRRLPNGTELRGRIVETEAYLGPEDEAAHSRGGRQTPRNRGMFMKPGTLYVYIIYGMYFCMNISSQGD--GACVLLRALEPLEGLETMRQLRSTLLKDRELCSGPSKLCQALAINKSFDQRDLAQD-EAVWLERGPLEPSEPAVVAAARVGV--AGEWARKPLRFYVRGSPWVSVVDRVAE--------------------

General information: TITO was launched using: RESULT: Template: 3UBY.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1115 -1381 -1.24 -7.01 target 2D structure prediction score : 0.57 Monomeric hydrophicity matching model chain A : 0.76 3D Compatibility (PKB) : -1.24 2D Compatibility (Sec. Struct. Predict.) : 0.57 1D Compatibility (Hydrophobicity) : 0.76 QMean score : 0.503

(partial model without unconserved sides chains): PDB file : Tito_3UBY.pdb: (Unconserved sides chains are recalculated) : Sequence: align-3UBY-query.scw PDB file : Tito_Scwrl_3UBY.pdb: