Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKIKSYTSIWAVEKVIYAINDFQLPFPVTFNQMAWFVLSLLFVIVFAHVPPLSMIEEVFLKYLGIPVAVTWFMSQKTFDGKKPLGFLRSFISYHLRF---KVTFAGKKVKEQKKRWDEPSTLVRSVNYVSD
3RKC Chain:B ((513-549))----------------------------------------------------------------------SLDWSKVTLDGRPLTTIQQYSKTFFVLPLRGKLSFWE-------------------------


General information:
TITO was launched using:
RESULT:

Template: 3RKC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 49 -7517 -153.40 -221.07
target 2D structure prediction score : 0.35
Monomeric hydrophicity matching model chain B : 0.48

3D Compatibility (PKB) : -153.40
2D Compatibility (Sec. Struct. Predict.) : 0.35
1D Compatibility (Hydrophobicity) : 0.48
QMean score : 0.190

(partial model without unconserved sides chains):
PDB file : Tito_3RKC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3RKC-query.scw
PDB file : Tito_Scwrl_3RKC.pdb: