Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKLHELKPAEGSRQVRNRVGRGTSSGNGKTAGRGQKGQKARSGGGVRLGFEGGQTPLFRRLPKRGFTNVNRKDYAVINLDVLNRFEDGAEVTPVALVEAGIVKNEKAGIKVLANGELNKKLTVKAAKFSKAAQEAIEAAGGSIEVI
5GAE Chain:M ((1-143))MRLNTLSPAEGSKKAGKRLGRGIGSGLGKTGGRGHKGQKSRSGGGVRRGFEGGQMPLYRRLPKFGFTSRKAAITAEIRLSDLAKVEGGV-VDLNTLKAANIIGIQIEFAKVILAGEVTTPVTVRGLRVTKGARAAIEAAGGKIE--


General information:
TITO was launched using:
RESULT:

Template: 5GAE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain M - contact count / total energy / energy per contact / energy per residue : 401 -46730 -116.53 -326.78
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain M : 0.81

3D Compatibility (PKB) : -116.53
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.539

(partial model without unconserved sides chains):
PDB file : Tito_5GAE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5GAE-query.scw
PDB file : Tito_Scwrl_5GAE.pdb: