Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIKAALFDLDGVLVDTARYHYEAWLVLANQLSIPFTEKE-NEQLKGISRTESLERLLSFGKMEQKFSEKEKSAFAEQKNNLYLQAIQKMDETSVLPGAIAVLEYLKKTNIKIGLGSASKNARLILEKTNLTSYFDVLIDGTQVSKAKPDPEVFLKGAQQLNVPPNACLVIEDSEAGCQAALAGNMHVLGIGENINLPSAEYVIPDLTVFDQVRSFWHLSEAVSRI
4C4R Chain:A ((3-207))---KAVLFDLDGVITDTAEYHFRAWKALAEEIGINGVDRQFNEQLKGVSREDSLQKILDLA--DKKVSAEEFKELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASKNGPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRPEDLGDDIVIVPDTSHY----------------


General information:
TITO was launched using:
RESULT:

Template: 4C4R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1086 2876 2.65 14.10
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain A : 0.82

3D Compatibility (PKB) : 2.65
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.573

(partial model without unconserved sides chains):
PDB file : Tito_4C4R.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4C4R-query.scw
PDB file : Tito_Scwrl_4C4R.pdb: