Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDKFVAFME-KHFIPVASKIGAQRHLVAIRD-SFMVSMPLMIL----GALAVMINNLPIPGFQELMNSIFGGESWKGFGAAAWNGTFAILSVLIAFLLAYHLANGY-RKDGVSAGVISLGSFFALGGALGMSSN-------GLFIAIIVGIISTEIFVRLSGNEKLIIKMPDGV-------PPAVAKAFASL------LPAMIT-------------ISAFALVAAIFAAFGVDDIVGSF-YTVVQEPFMGLANSYPSALLLAFITPFLWFFGLHGANMVDPLMQTINAPAIEANVNAIAAGHSAPFIVN-KPFFDSFVNLGGTGATLGLLLAIYL-VGRKNKPYMVVTNLSIAPGVFNINEPTMFGLPIVLNPIMFIPFILTPMVLVSVAYFATSTG------------LVP-AATVMPPWVTPPIIGG-VLATKSIAGGVLAAVNLVLSILIYL-PFVKVATIQERRKEALDA---------------------------------------------------
4C0E Chain:A ((1674-2193))LEAAHLLEQMEYVFDEWIHLCNNPHATERAAMIFVHQLHSVQLVTNRDEFLLFLRHALDKSVERFEQGIHSGAS----IAESFQAVEALVKLIIIFVKSHSAAVAFMD------SILALGVLVANSHHVKRGENFNQRVFYRFFALLLHEVGLLAGHFSKSHYEQIILNFAARLFDMRPNLLPGFACAWAGLVSHRAFLPVILGLPDEKGWAPFTKLLEQFLGCVGELVKTFTVSSLGKEMYHAALKILIVLQHDFP-IYLDKFRVQLCQSLPLHATQLVNLILAAIP-PNCNSLADPFQAGLKVDKIPDMKERPPTAFDSAGLLREAGLLDILERML--QNGP----SEDGVAQINHAINKSTSFGYVPLGVNRRLIDAVVARFAEFAINRASSRSDSAIFVAGANDIKTLQMLVTEVSPEARYYLVSSMVNELRYPNAYTNYFSQALLDIFGHDMSDPEENLVREQIVRVLLERVLGYWPQPWGLIITILELLKNDKYLFFELPFIKATPEVAERFTALARSAA


General information:
TITO was launched using:
RESULT:

Template: 4C0E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 22 1341 60.93 3.36
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : 60.93
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.435

(partial model without unconserved sides chains):
PDB file : Tito_4C0E.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4C0E-query.scw
PDB file : Tito_Scwrl_4C0E.pdb: