Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSSQSHPDGLSGRDQPVELLNPARVNHMPSTVDVATALPLQVAPSAVPMDLRLDHQFSLPVAEPALREQQLQQELLALKQKQQIQRQILIAEFQRQHEQLSRQHEAQLHEHIKQQQEMLAMKHQQELLEHQRKLE-RHRQEQELEKQHREQKLQQLKNKEKGKESAVASTEVKMKLQEFVLNKKKALAHRNLNHCISSDPRYWYGKTQHSSLDQSSPPQSGVSTSYNHPVLGMYDAKDDFPLRKTASEPNLKLRSRLKQKVAERRSSPLLRRKDGPVVTALKKRPLDVTDSACSSAPGSGPSSPNNSSGSVSAENGIAPAVPSIPAETSLAHRLVAREGSAAPLPLYTSPSLPNITLGLPATGPSAGTAGQQDAERLTLPALQQRLSLFPGTHLTPYLSTSPLERDGGAAHSPLLQHMVLLEQPPAQAPLVTGLGALPLHAQSLVGADRVSPSIHKLRQHRPLGRTQSAPLPQNAQALQHLVIQQQHQQFLEKHKQQFQQQQLQMNKIIPKPSEPARQPESHPEETEEELREHQALLDEPYLDRLPGQKEAHAQAGVQVKQEPIESDEEEAEPPREVEPGQRQPSEQELLFRQQALLLEQQRIHQLRNYQASMEAAGIPVSFGGHRPLSRAQSSPASATFPVSVQEPPTKPRFTTGLVYDTLMLKHQCTCGSSSSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSEAHTLLYGTNPLNRQKLDSKKLLGSLASVFVRLPCGGVGVDSDTIWNEVHSAGAARLAVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAKLLQQRLSVS-KILIVDWDVHHGNGTQQAFYSDPSVLYMSLHRYDDGNFFPGSGAP--DEVGTGPGVGFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTPLGGYNLSARCFGYLTKQLMGLAGGRIVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQQRPNANAVRSMEKVMEIHSKYWRCLQRTTSTAGRSLIEAQTCENEEAETVTAMASLSVGVKPAEKRPDEEPMEEEPPL
5G0J Chain:A ((17-772))VQGKSKATG-------TGLVY--------------------------------------------------------------------VDAFTRFHCLWDASHP----ECPARVSTVMEMLETEGLLGRCVQVEARAVTEDELLLVHTKEYVELMKSTQNMT---------EEELKTLAEKYDSVYLHPGFFSSACLSVGSVLQLVDKVM---TSQLRNGFS--INRPP-GHHAQAD--KMNGFCMFNNLAIAARYAQKRHRVQRVLIVD--------------WDVHHG-----------------------QGIQYIFEEDP---SVLYFSVHRYEDGSFWP------------HLKESDSSSVGSGAGQGYNINLPW--NKVGMESGDYITAFQQ---------------LLLPVAYEFQPQLVLVAAGFDAVIGDPK---GGMQVSPECFSILTHMLKGVAQG-----------RLVLALE-----------------------------------------------------------GGYNLQSTAEGVCASMRSLLGD------PCPHLPSSGAPC-------ESALKSISKTISDLYPFWKSLQT------FEGG-PLSEVSPLPAPVCAEVKVSSPI------TGLVYDQRMMLHHNM--WDSHHPELPQRISRIFSRHEELRLLSRCHRIPARLATEEELALCHSSKHISIIKSSE-HMKPRDLNRLGDEYNSIF--------------ISNE--SYTCALLAAGSCFNSAQAILTGQVRNAVAIVRPPGHHAEKDTACGFCFFNTAALTARYAQSITRESLRVLIVDWDVHHGNGTQHIFEEDDSVLYISLHRYEDGAFFPNSEDANYDKVGLGKGRGYNVNIPWNGG---KMGDPEYMAAFHHLVMPIAREFAPELVLVSAGFDAARGDP--LGGFQVTPEGYAHLTHQLMSLAAGRVLIILEGGYNLTSISESMSMCTSMLLGDSPPSLDH---LTPLKTSATVSINNVLRAHAPFWSSLR-----------------------VNIPESLRLSL------------------


General information:
TITO was launched using:
RESULT:

Template: 5G0J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 5171 -36946 -7.14 -49.13
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -7.14
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.308

(partial model without unconserved sides chains):
PDB file : Tito_5G0J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5G0J-query.scw
PDB file : Tito_Scwrl_5G0J.pdb: