Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMTMPKRQRSDEKAAHHVQLSVESGSRFDAYIRGWMQGTVEQPLLRPSLLPPLTPLPTLAAPSKSGAAQTPATASAATTVGDLSRLCEWTPPSAVMPASRTAVVYDTSMLDHVSP---DAGDYERPARLQSTLDHLTVIGLLPCCQRIPARTAKKHELRRVHCRELIDTVDQLDFFMG-IQ-E--------------GRGSVIGQDLFA-SEHTSRAARMAAGCVIEAVKAVLSGAATNAFAIVRPPGHHAGPANAAGYCLYNNVAVAARAAQAELAAAQAEHNPAGDAQQPRILILDWDVHHCDGTESIFYDDPSVLVISLHQYGNGHGHVLRKVSSAAAKNPAEISTPSKEAITADDLAALLSGGAIEPPPVSAPEASRPEAASDPPQGSTEGRRVRAAVDYNSLAAQIEEEGDAEIAALFGVDLNAASTSSSNSSSASTSSSVSADSTSVARNGTRPVHYAGDTVGVSFDETPRQRATGAEEEELFYPGTGHLNRVGGDATPAAQGRNINIPWPTH---GMGDLEYLQLLHEVVLPAAREFRPELVLISCGFDSASGD--LLGSMCLTPSGYYIMTRLMAQNF-PKLVVALEGGYNVRNVALCSEAVMRALLESSGCPGDRLPKS---RMLWCQASSLVADIKRMHAPYWSCFSPNM
2VQJ Chain:A ((6-390))-----------------------------------------------------------------------------------------------PRFTTGLVYDTLMLKHQCTCGSSSSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSEAHTLLYGTNPLNRQKLDSKKLLGSLASVFVRLPCGGVGVDSDTIWNEVHSAGAARLAVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAKLLQQR-L------------SVSKILIVDWDVHHGNGTQQAFYSDPSVLYMSLHRYD---------------------------------------------------------------------------------------------------------------------------------------------------------------DGNFFPGSGAPDEVGTG---PGVGFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTPLGGYNLSARCFGYLTKQLMGLAGGRIVLALEGGHDLTAICDASEACVSALLGNELDP---LPEKVLQQRPNANAVRSMEKVMEIHSKYWRCLQRT-


General information:
TITO was launched using:
RESULT:

Template: 2VQJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2163 -57309 -26.49 -160.98
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -26.49
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.463

(partial model without unconserved sides chains):
PDB file : Tito_2VQJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2VQJ-query.scw
PDB file : Tito_Scwrl_2VQJ.pdb: