Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence----------------------------------------------------------------------------------------------------------------------------------------------------------------MYSFTKGAIILSGGSI-MKKKPIYLWVLLILSALI--SVPSLFGIVSPLPSKEALRAAQKQVAGVNAQQLEDQLNYTYRVAEASHSIFNVALIVLSTILVVVAIVFLVRKNLQYANYTYVGYVLLAIIG---SIYGY----VGL-QDAVQLVQDESMRLTVSIGSKAVSIFYIVIN-------VLFLALVFYKMWRQQKALAEEEETEELT------------------------------------------------------------------------------------------------------------------------------------------------------
2OCC Chain:A ((1-514))MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNL-----NTTFFDPAGGGDPILYQHLFWFFGHP--EVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMVFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNLK


General information:
TITO was launched using:
RESULT:

Template: 2OCC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 753 -90909 -120.73 -488.76
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.49

3D Compatibility (PKB) : -120.73
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.49
QMean score : 0.275

(partial model without unconserved sides chains):
PDB file : Tito_2OCC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2OCC-query.scw
PDB file : Tito_Scwrl_2OCC.pdb: