Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRVIVLGSGVIGVASAYYLARQGAEVTVLDRQSGPAEETS-FGNAGQISPGYSTPWAAPGIPFKAVKWMFQHHAPLAINLDGSMWQLQWMAQMLKNCNPQSYAVNKERMMRVAEYSRDCLRELRKDTGIHYENRAKGTLQLFRKEAQMEAVQRDISVLEECGVSYELLNGNELGRVEPALANAQDKLVGGLHLPNDETGDCYLFTNALAQIAKELGVNFQFNQNVEKLIVEGDQIKGVQVNGKVLTADRYVLAFGSYSRDFLKPLDLQLPVYP---VKGY------SLTIPIVAPAFAPQSTVLDETY-----------KIAITRFDQRIRVGGMAELSGFNLGLNEDRHATLQMVTQDLFPGGDMEQASFWTGLRPMTPDSTPIIG-ATRFKNLFLNTGHGTLGWTMACGSGKLISDIVLNHKTDISTDGLSIQRYSHAHAA
3BHK Chain:A ((7-378))--VIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDPPHTNGSHHGDTKIIRHAYGEG---------------REYVPLALR------------------------------------SQELWYELEKET--HHKIFTKTGVLVFGPKGESAFVAETMEAAKEHSLTVDLLEGDEINKRWPGITVPEN--YNAIFEPNSGVLFSENCIRAYRELAEARGAKVLTHTRVEDFDISPDSVKIETANGS-YTADKLIVSMGAWNSKLLSKLNLDIPLQPYRQVVGFFESDESKYSNDIDFPGFMVE--VPNGIYYGFPSFGGCGLKLGYHTFGQKIDPDTINR----EFGVYPEDESNLRAFLEEYMPGANGELKRGAVCMYTKTLDEHFIIDLHPEHSNVVIAAGFSGHGFKFSSGVGEVLSQLALTGKTEHDISIFSINR-------


General information:
TITO was launched using:
RESULT:

Template: 3BHK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2173 12630 5.81 36.09
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : 5.81
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.426

(partial model without unconserved sides chains):
PDB file : Tito_3BHK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3BHK-query.scw
PDB file : Tito_Scwrl_3BHK.pdb: