Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMSRVAKAPVTVPNGVTVTQNGRQVEVKGSKGTLSFNL--HALVELKQEEGKLQLAPAKESKDAWMQAGTARAVLNNLVKGVSEGFERKLQLVGVGYKAVVKGTVVNLNLGYSHPIDYALPEGVTAETPTATEIILKSANKQLLGQVAAEIRAYRSPEPYKGKGVRYSDEVILRKEAKKK
5MMI Chain:G ((41-215))-SRIGKQPITVPANVAIAMEGQDLKVKGPLGELSITYPREVLVE-KQESGFLRVRKAVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLVGVGYRATVEGKDLILSLGFSHPVRMAIPDELQVKVEENTKVTVSGRDKSVVGQFAATIRSWRPPEPYKGKGVRYVDEVVRRKEGK--


General information:
TITO was launched using:
RESULT:

Template: 5MMI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain G - contact count / total energy / energy per contact / energy per residue : 752 12633 16.80 73.02
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain G : 0.84

3D Compatibility (PKB) : 16.80
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.84
QMean score : 0.589

(partial model without unconserved sides chains):
PDB file : Tito_5MMI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5MMI-query.scw
PDB file : Tito_Scwrl_5MMI.pdb: