Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKNSKGFLTILLAFIGYMLVGLLKSYSNELLNFSTFINDTLVPSLFFIVFFAVGYFIIKI
2AP8 Chain:A ((1-20))--------IGPVLGLVGSALGGLLKKI----------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2AP8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 7 -1450 -207.07 -76.29
target 2D structure prediction score : 0.74
Monomeric hydrophicity matching model chain A : 0.51

3D Compatibility (PKB) : -207.07
2D Compatibility (Sec. Struct. Predict.) : 0.74
1D Compatibility (Hydrophobicity) : 0.51
QMean score : 0.398

(partial model without unconserved sides chains):
PDB file : Tito_2AP8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2AP8-query.scw
PDB file : Tito_Scwrl_2AP8.pdb: