Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceQVFGCFVQMSVRTQDSKDETNISSGGYLLTTNPGQLVFTDGNNNITVKVDKDCQSAGISYHRSEVHFTALQKLSENGGPFEFDQPLIELQ
5V6H Chain:E ((49-65))----------------------------------------------------------------------VALDETLGDFAFPDEFL---


General information:
TITO was launched using:
RESULT:

Template: 5V6H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain E - contact count / total energy / energy per contact / energy per residue : 16 -6160 -384.97 -362.32
target 2D structure prediction score : 0.76
Monomeric hydrophicity matching model chain E : 0.56

3D Compatibility (PKB) : -384.97
2D Compatibility (Sec. Struct. Predict.) : 0.76
1D Compatibility (Hydrophobicity) : 0.56
QMean score : 0.743

(partial model without unconserved sides chains):
PDB file : Tito_5V6H.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5V6H-query.scw
PDB file : Tito_Scwrl_5V6H.pdb: