Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPGRSCVALVLLAAAVSCAVAQHAPPWTEDCRKSTYPPSGPTYRGAVPWYTINLDLPPYKRWHELMLDKAPVLKVIVNSLKNMINTFVPSGKIMQVVDEKLPGLLGNFPGPFEEEMKGIAAVTDIPLGEIISFNIFYELFTICTSIVAED---KKGHLIHGRNMDFGVFLGWNINNDTWVITEQLKPL--T---VNL-DFQRNNKTVFKASSF----AGYVGMLTGFKPGLFSLTLNERFSINGGYLGILEWILGKKDVMWIGFLTRTVLENSTSYEEAKNLLTKT----KILAPAYFILGGNQSGEGCVITRDRKESLDVYELDAKQGRWYVVQTNYDRWKHPF-----------------------------F------L----------DDRRTPAKMCLNRT----------------SQENISFETMYDVLSTK----P-----------VL------NKLTVYTTLIDVTKGQFETYLRDCPDPCIGW
5INR Chain:C ((9-329))----------------------------------------------------------------------------------------------------------------------------------------------CTSILVGKKASIDGSTLISRNDDGHEAL-D--PQRFVVVNPEDQPRDYTSVISKVNVKLPDDPQRYTSIPNSILTNGIWPA-AGINSSNVAMSATETITTNSRVQ--GLD-PFVENGLGEEDLVTVVLPYVKSAREGVKRLGSLLEEYGTYEPNGISFA-DN-EEVWWLETIGGHHWAAVRIP---DDAYVVAPNR--MNIDQFDFDSDDTLCSSDLKDLIDNNNLNPDFENYNLRHIFGSASIKDTVYNNPRTWYGQKFFSPDDTADDPMEQDLPFICHANRKISVEDVKFVLSSHFENTKYDVYGSGSQSDKTLFRPIGINRNHNVHILQIRN-----------------


General information:
TITO was launched using:
RESULT:

Template: 5INR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1225 46968 38.34 211.57
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain C : 0.57

3D Compatibility (PKB) : 38.34
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.366

(partial model without unconserved sides chains):
PDB file : Tito_5INR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5INR-query.scw
PDB file : Tito_Scwrl_5INR.pdb: