Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSFLSKNGAGILACLLISILSWYLGGFFPVIGAPVFAIFIGMLLHPFLSSYKQLDAGLTFSSKKLLQYAVVL----LGFGLNISQVFAVGQSSLPVILSTISIALIIAYLFQRFFALDTKLATLVGVGSSICGGSAIAATAPVIHAK---EKE-VAQAISVIFFFNVLAALIFPTLGTWLHLSNEGFALFAGTAVNDTSSVTAAASAWDSLYQSNTLESATIVKLTRTLAIIPITLFLSYWQSRQQENKQSLQLKKVFPLFILYFILASLLTTLLTSLGVSSSFFTPLKQLSKFLIVMAMSAIGLKTNLVAMVKSSGKSILLGAICWIAIILTTLGMQTLIGIF
5BZ3 Chain:A ((28-169))------------------------------QPVVIGEVLAGVLVGPALL--GLVHE-G-EILEFLAELGAVFLLFMVGLETRLKDILAVGKEAFLVAVLGVALPFLGGYLYGLEIGFETLPALFLGT--ALVATSVG-ITARVLQELGVLSRPYSRIILGAAVIDDVLGLIVLACVNGV---------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5BZ3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 361 -43913 -121.64 -327.71
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.51

3D Compatibility (PKB) : -121.64
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.51
QMean score : 0.145

(partial model without unconserved sides chains):
PDB file : Tito_5BZ3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5BZ3-query.scw
PDB file : Tito_Scwrl_5BZ3.pdb: