Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAKLEVKDNKKLVLKSVICKKLHDTKV--------EDVDQEINRFHQHLQLLKAQIFGPLIVKSCGTTIHDDGLITTDFEFYIQAHNAQQYSNIYDVQDSISVPYCLYVRFEDSP-EYLQYAYSKLDL-YVYEN-DIQTD-GIVYTVYVNSSPEKMVVDIFIPIVSL
3GK6 Chain:A ((25-170))---------SEINGFEVTGFVVR-TTNADEMNPMTAKIGNLWEKFYLNA-APKLTDKSKVYGLYTNYESDF--TGAFDVIACSDTLSP-QLLSESVKTKVSS-GKYVTFSATGEMPQVVIDLWNEVWNYFA---CPHKRAYTTDFEYYKSAN----TVEISIAVR--


General information:
TITO was launched using:
RESULT:

Template: 3GK6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 519 -14557 -28.05 -111.12
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : -28.05
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.347

(partial model without unconserved sides chains):
PDB file : Tito_3GK6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GK6-query.scw
PDB file : Tito_Scwrl_3GK6.pdb: