Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRSGRDKKIAGVCAGVAHYLDMDPTIVRVIWGVLTCCYGAGIVAYIILWIIAPVATDY
2YWD Chain:A ((73-84))----GSLALFGTCAGA------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2YWD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 3 61 20.33 5.08
target 2D structure prediction score : 0.17
Monomeric hydrophicity matching model chain A : 0.39

3D Compatibility (PKB) : 20.33
2D Compatibility (Sec. Struct. Predict.) : 0.17
1D Compatibility (Hydrophobicity) : 0.39
QMean score : 0.389

(partial model without unconserved sides chains):
PDB file : Tito_2YWD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YWD-query.scw
PDB file : Tito_Scwrl_2YWD.pdb: