Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLRLV-----YYQFLHNKKQWLGVSPVIFVSSLVMGLAVNGVINVENNSQVFVGLPDPKPIFMF-----------PIVFGGVTLFFVL------SNIINMLVEIFRDDYELLEVLGASRLQLSFLVGGQIFIISSIISFIAYLCSIFVTSNYYYFLQYFFGENILPDIQFQTSAVGCIITVVLISFLA--FLSGCFYTFKKIRNRKSSKIRHVLSIVKRILLLAGFSVIWLLSLQQIFQDSTILAKAQIIFNIVILDIVIIYQLSPFIQSCFIKLLSIIIFRNNFMFIVSKWNLLYCKSYIKSISAAITGAILLISSFQMISQNILS-QFQDDSDLELKVAFIVYVGAPILIVLAN---IISIAFLSSHQER------IEIQQFEILGTSNYQMVKIKVGEAIFLTFVTSLIAFLL------NIKIMALIYYSLEDIL-----------IDDMNLL-------------GLILPNFIVSIILFILIFITKSSYFIFKNAKIIS-----------
4IWS Chain:A ((23-515))MNRSALDFRHFVDHLRRQGDLVDVHTEV-DANLEIGAITRRVYERRAPAPLFHNIRDSLPGARVLGAPAGLRADRARAHSRLALHFGLPEHSGPRDIVAMLRAAMRAEPIAPRRLERGPVQENVWLGEQV----DLTRFPVPL--LHEQDGGRYFGTYGFHVVQTPDGSWDSWSVGRLMLVDRNTLAGPTIPTQHIGIIREQWRRLGKPTPWAMAL--------GAPPAALAAAGMPLPEGV--SEAGYVGALVGEPVEVVR---TQTNGLWVPANTEIVLEGEISLDETALEGPMGEYHGYSFPIGKPQPLFHVHALSFRDQPILPICVAGTPPEENHTIWGTMISAQLLDVAQNAGLPVDMVWCSYEAATCWAVLSIDVQRLAALGTDAAAFAA-RVAETVFGSHAGHLVPKLILVGNDIDVTEIDQVVWALATRAHPLHDHFAFPQIRDFPMVPYLDAEDKARGSGGRLVINCLYPEQFAGQMRAATASFRHAYPTALRRRVEERWSDYGF


General information:
TITO was launched using:
RESULT:

Template: 4IWS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2568 -193516 -75.36 -462.96
target 2D structure prediction score : 0.31
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -75.36
2D Compatibility (Sec. Struct. Predict.) : 0.31
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.146

(partial model without unconserved sides chains):
PDB file : Tito_4IWS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4IWS-query.scw
PDB file : Tito_Scwrl_4IWS.pdb: