Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKELHINTILAQAGIKSDEATGALVTPLHFSTTY--QHPEFGRS--TGFDYTRTKNPTRSKAEEVLAAIESADYALATSSGMSAIVLAF-SVFPVGSKVLAVRDLYGGSFRWFNQVEQEGRFHFTY--ANTEEELIAELEKDVDVLYIETPTNPLMLEFDIEKLAKLAHAKGAKVVVDNTFYSPIYQRPIEDGADIVLHSATKYLAGHNDVLAGVVVTNSLELYEKLFYNL-NTTGAVLSPFDSYQLLRGLKTLSLRMERSTANAQEVVAFLKDSPAVKEVLYTG----------------RGGMISFKVADETRIP-HILNSLKVFSFAESLGGVESLITYPTTQTHADIPAEVRHSYGLTDDLLRLSIGIEDARDLIADLRQALEG
5K30 Chain:A ((10-393))-------NTQIVHAGQQPDPSTGALSTPIFQTSTFVFDSAEQGAARF------RLGNPTTDALEKKLAVLERGEAGLATASGISAITTTLLTLCQQGDHIVSASAIYG-THAFLSHSMPKFGINVSFVDAAKPEEIRAAMRPETKVVYIETPANPTLSLVDIETVAGIAHQQGALLVVDNTFMSPYCQQPLQLGADIVVHSVTKYINGHGDVIGGIIVGKQEFIDQARFVGLKDITGG-MSPFNAWLTLRGVKTLGIRMERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFEIAGGLEAGRRMINSVELCLLAVSLGDTETLIQHPASMTHSPVAPEERLKAGITDGLIRLSVGLEDPEDIINDLEHAI--


General information:
TITO was launched using:
RESULT:

Template: 5K30.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1878 -18967 -10.10 -54.66
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.79

3D Compatibility (PKB) : -10.10
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.540

(partial model without unconserved sides chains):
PDB file : Tito_5K30.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5K30-query.scw
PDB file : Tito_Scwrl_5K30.pdb: