Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSRKPFIAGNWKMNKNPEEAKAFVEAVASKLPSS--DLVEAGIAAPALDLTTVLAVAKGSNLKV--AAQNCYFENAGAFTGETSPQVLKEIGTDYVVIGHSERRDYFHETDEDINKKAKAIFANGMLPIICCGESLETYEAGKAAEFVGAQVSAALAGLTAEQVAASVIAYEPIWAIGTGKSASQDDAQKMCKVVRDVVAADFGQEVADKVRVQYGGSVKPENVASYMACPDVDGALVGGASLEAESFLALLDFVK
3TAO Chain:A ((2-251))-SRKPLIAGNWKMNLNHYEAIALVQKIAFSLPDKYYDRVDVAVIPPFTDLRSVQTLVDGDKLRLTYGAQDLSPHDSGAYTGDVSGAFLAKLGCSYVVVGHSERRTYHNEDDALVAAKAATALKHGLTPIVCIGEHLDVREAGNHVAHNIEQLRGSLAGLLAEQIGSVVIAYEPVWAIGTGRVASAADAQEVCAAIRKELASLASPRIADTVRVLYGGSVNAKNVGDIVAQDDVDGGLVGGASLDGEHFATL-----


General information:
TITO was launched using:
RESULT:

Template: 3TAO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1365 -21785 -15.96 -88.55
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.82

3D Compatibility (PKB) : -15.96
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.558

(partial model without unconserved sides chains):
PDB file : Tito_3TAO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3TAO-query.scw
PDB file : Tito_Scwrl_3TAO.pdb: