Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTVTTYIGLGSNLGDSRQILSEAITKLKSLGEV------KVSKLYQSPPMGPQDQPNYLNAVAQLKTELLPLELLDQLQRFEQEAGRVR-LRHWGERTLDLDLLIYGNEKIQNERLTVPHVGILQRDFVVIPLLDLDADLHINDQPLKNLELIQQPTLTVLADESWA
1EQM Chain:A ((1-139))--TVAYIAIGSNLASP---LEQVNAALKALGDIPESHILTVSSFYRTPPLGPQDQPDYLNAAVALETSLAPEELLNHTQRIELQQGRVRKAERWGPRTLDLDIMLFGNEVINTERLTVPHYDMKNRGFMLWPLFEIAPELVFPD-----------------------


General information:
TITO was launched using:
RESULT:

Template: 1EQM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 603 15235 25.27 115.42
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain A : 0.80

3D Compatibility (PKB) : 25.27
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.454

(partial model without unconserved sides chains):
PDB file : Tito_1EQM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1EQM-query.scw
PDB file : Tito_Scwrl_1EQM.pdb: