Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKQYMTHRCLIAPPEMADDFFANTVIYLARHDEEGAQGIIINRPAGIQIKELLNDLDIDADNVNPHEVLQGGPLRPEAGFVLHTGQPTWHSSIAVGENVCITTSKDILDAIAHNEGVGRYQIALGYASWGKNQLEDEIARGDWLIC-DADMDLIFNLP---YDDRWDAAYKKIGVDRTWLASEI--GHA
5UEB Chain:A ((6-147))-------------------HHHMKSKLTVVYYDLES----------------------------NIAEEILSGNIMPDGNFLIQEI-PLFAPNLALNDIVAIEREDKMLFFDHLIKASGNTTINIVVLDHFPKDLLAAIEEHSGKIRKNGENYLSVNFPPKKYNSDLKGILNRYEEANILSYREACLGFS


General information:
TITO was launched using:
RESULT:

Template: 5UEB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 598 -43925 -73.45 -322.98
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -73.45
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.374

(partial model without unconserved sides chains):
PDB file : Tito_5UEB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5UEB-query.scw
PDB file : Tito_Scwrl_5UEB.pdb: