Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMNMAEEVHHAPNLKRSKYFATMALIIVVVLWIGLLITNRFLPEYTDLIHILMLGAEAGVVGGLADWYAITILFRNPFGKLPIPKFLRDHTEIIPRNKARIAESMGRFVQENFLSPQVVERSLEKTDLSLAIGQWLASPQNNTQVVQLIQQTVPKVFEFVSQEQIANFVQNNSVQWVRNTQVNKLASEMLRAVLENDFHQDVLQRGLDIAHEWVVQNPDKTRELTRKMFKALGVWSLAKGASWIGIDVQQRTIDSLVEKVESMLADHEHPWRQEIETIAHSLMLELANPESIASQRLNSGKDALLDSPQVLNFISGAVTILCDAIKEDLMKEDSGIAMNLRAAIQQLGENLVQNVKVREVLNKEMTGLAMNFTDQYSHKIIRYVSERIHEWDSREMIGKIENEVGGDLHMIRVNGVVVGAFIGLTLGVIRAAIESIL
2GYP Chain:A ((2-33))---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VSKLSQLQTELLAALLESLSKEALIQALGEW------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2GYP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 18 -2659 -147.72 -85.77
target 2D structure prediction score : 0.74
Monomeric hydrophicity matching model chain A : 0.50

3D Compatibility (PKB) : -147.72
2D Compatibility (Sec. Struct. Predict.) : 0.74
1D Compatibility (Hydrophobicity) : 0.50
QMean score : 0.583

(partial model without unconserved sides chains):
PDB file : Tito_2GYP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2GYP-query.scw
PDB file : Tito_Scwrl_2GYP.pdb: