Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-----------------MNKLKLKGRPRKGKFECFSTQAWF-----------YAVQMVSNIGTAYALEKVFFPTRFKTVKGKIIRPR---LFDRYKMGTITVGKKLV-------------QQVEAS-YTNTALWFNAVLWKILDERCDDFELNAWFRSLDQNLMQFFFKSTLTVDDSIKIQ--VKKINQKNFKKL---KNYELLD---VFTLVVLAIQMSIEKKDMDSLDK------------ALYGYHQIRRTLQEHPIFSKFYENLLSTLEL---HFIQQGEHTF---------------------------------GSPIALMLWEYD---PMMSVHPQMRMATISEGKSVQQTISDASYLVKAQVCCFE---KYYC-------NSDLKATIRLYYSIPLGLSLLPNVDSTVLIPFAKKFFPLARFPEIIAQDKENMIAMTMMFGDELDWESLESMVGIAVLQEIVYFNEDRFVETHTRFWQERLGLIK--------------------------------
3ALX Chain:A ((8-549))CSGPTTIRGQFSNMSLSLLDLYLGRGYNVSSIVTMTSQGMYGGTYLVEKPSMYRVFEVGVIRNPGLGAPVFHMTNYLEQPVSNDLSNCMVALGELKLAALCHGEDSITIPYQGSGKGVSFQLVKLGVWKSPTDMQSWVPLSTDDPVIDRLYLSSHRGVIADNQAKWAVPTTRT-DDKLRMETCFQQACKGKIQALCENPEWAPLKDNRIPSYGVLSVDLSLTVELKIKIASGFGPLITHGSGMDLYKSNHNNVYWLTIPPMKNLALGVINTLEWIPRFKVSPYRFTVPIKEAGGDCHAPTYLPAEVDGDVKLSSNLVILPGQDLQYVLATYDTSRVEHAVVYYVYSPSRSFSYFYPFRLPIKGVPIELQVECFTWDQKLWCRHFCVLADSESGGHITHSGMVGMGVSCCPKIVQQ---LGSDVLLPLTHERINTSMNKSIHIVVTMAKSLENSVE--NKIVSLDPSEA----GPPRYLKDRYRFYLEHLSLAIYESTKKDEGWYFMTLEKNISVQRFCLHLKLYE


General information:
TITO was launched using:
RESULT:

Template: 3ALX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2029 -55674 -27.44 -150.88
target 2D structure prediction score : 0.27
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -27.44
2D Compatibility (Sec. Struct. Predict.) : 0.27
1D Compatibility (Hydrophobicity) : 0.62
QMean score : -0.008

(partial model without unconserved sides chains):
PDB file : Tito_3ALX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3ALX-query.scw
PDB file : Tito_Scwrl_3ALX.pdb: