Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLIHLFFRNNKKSKMHLKLNNYLISGEYMNIPRFGLGTFRLKEQAVIDSVKNALDVGYRAIDTAQIYENEAAIGQAIAESGVSRQDLFLTTKIWVDNFAQDKFIPSLKESLQKLRTDHVDLTLIHWPAPDLGVSIPEIMQLLLEAKQQGLTKQIGISNFNIALTQQAIDTIGVEHIATNQIELSPYLQNHKLVNFLQEKNIDVTSYMTLAYGK---VLQDPVLAEIAAANKATTAQIALAWALQRGFAVIPSSTKRENLISNLKAQDIELTAAEMQMIAELD--RNSREVSPEPWAPVWD
1M9H Chain:A ((13-274))-----------------------------SIPQLGYGVYKVPPADTQRAVEEALEVGYRHIDTAAIYGNEEGVGAAIAASGIARDDLFITTKLWNDRHDGDEPAAAIAESLAKLALDQVDLYLVHWPTPAADNYV-HAWEKMIELRAAGLTRSIGVSNHLVPHLERIVAATGVV-PAVNQIELHPAYQQREITDWAAAHDVKIESWGPLGQGKYDLFGAEPVTAAAAAHGK-TPAQAVLRWHLQKGFVVFPGSVRREHLEENLDVFDFDLTDTEIAAIDAMDPGDGSGRVSGHP------


General information:
TITO was launched using:
RESULT:

Template: 1M9H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1411 -84361 -59.79 -328.25
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : -59.79
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.569

(partial model without unconserved sides chains):
PDB file : Tito_1M9H.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1M9H-query.scw
PDB file : Tito_Scwrl_1M9H.pdb: