Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAIQRSGRFERIKKPLKSDMNVVPYIDVMLVLLVIFMVTAPMITSGIKVDLPQANNHPIESKDMPAMVTIGKDGNIYLQYEDYKDNEP-----LSLEKLESVLSEAQKKAEQENKQLTVLVNGDKTRPYGEVVSLMASLQEAGLTQVGLLTEPLK
2JWK Chain:A ((21-92))---------------------------------------------------------------VPVILEVAGIGKYAISI------GGERQEGLTEEMVTQLS----RQEFDKDNNTLFLVGGAKEVPYEEVIKALNLLHLAGIK----------


General information:
TITO was launched using:
RESULT:

Template: 2JWK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 224 -7925 -35.38 -118.28
target 2D structure prediction score : 0.88
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -35.38
2D Compatibility (Sec. Struct. Predict.) : 0.88
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.699

(partial model without unconserved sides chains):
PDB file : Tito_2JWK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2JWK-query.scw
PDB file : Tito_Scwrl_2JWK.pdb: